Sim, Adelene Y.L.: search on Z-Library

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1

In Vitro Selection of Mutant HDM2 Resistant to Nutlin Inhibition

Wei, Siau Jia, Joseph, Thomas, Sim, Adelene Y. L., Yurlova, Larisa, Zolghadr, Kourosh, Lane, David, Verma, Chandra, Ghadessy, Farid, Maki, Carl G.

Journal:

Year:

2013

Language:

english

File:

PDF, 2.60 MB

english, 2013

2

Mechanism of Enhanced Immature Dengue Virus Attachment to Endosomal Membrane Induced by prM Antibody

Wirawan, Melissa, Fibriansah, Guntur, Marzinek, Jan K., Lim, Xin Xiang, Ng, Thiam-Seng, Sim, Adelene Y.L., Zhang, Qian, Kostyuchenko, Victor A., Shi, Jian, Smith, Scott A., Verma, Chandra S., Anand, G

Journal:

Year:

2018

Language:

english

File:

PDF, 7.55 MB

english, 2018

3

Designing dual inhibitors of Mdm2/MdmX: Unexpected coupling of water with gatekeeper Y100/99

Lee, Xiong An, Verma, Chandra, Sim, Adelene Y.L

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2017

Language:

english

File:

PDF, 2.03 MB

english, 2017

4

Modeling the Structure of Keratin 1 and 10 Terminal Domains and their Misassembly in Keratoderma

Badowski, Cedric, Sim, Adelene Y.L., Verma, Chandra, Szeverényi, Ildikó, Natesavelalar, Chidambaram, Terron-Kwiatkowski, Ana, Harper, John, O’Toole, Edel A., Lane, E. Birgitte

Journal:

The Journal of Investigative Dermatology

Year:

2017

Language:

english

File:

PDF, 2.89 MB

english, 2017

5

Mixing and Matching Detergents for Membrane Protein NMR Structure Determination

Columbus, Linda, Lipfert, Jan, Jambunathan, Kalyani, Fox, Daniel A., Sim, Adelene Y.L., Doniach, Sebastian, Lesley, Scott A.

Journal:

Biophysical Journal

Year:

2009

Language:

english

File:

PDF, 37 KB

english, 2009

6

Modeling nucleic acids

Adelene YL Sim, Peter Minary, Michael Levitt

Journal:

Current Opinion in Structural Biology

Year:

2012

Language:

english

File:

PDF, 706 KB

english, 2012

7

In Vivo Mapping of Eukaryotic RNA Interactomes Reveals Principles of Higher-Order Organization and Regulation

Aw, Jong Ghut Ashley, Shen, Yang, Wilm, Andreas, Sun, Miao, Lim, Xin Ni, Boon, Kum-Loong, Tapsin, Sidika, Chan, Yun-Shen, Tan, Cheng-Peow, Sim, Adelene Y.L., Zhang, Tong, Susanto, Teodorus Theo, Fu, Z

Journal:

Year:

2016

Language:

english

File:

PDF, 5.69 MB

english, 2016

8

The role of gelsolin domain 3 in familial amyloidosis (Finnish type)

Zorgati, Habiba, Larsson, Mårten, Ren, Weitong, Sim, Adelene Y. L., Gettemans, Jan, Grimes, Jonathan M., Li, Wenfei, Robinson, Robert C.

Journal:

Proceedings of the National Academy of Sciences

Year:

2019

Language:

english

File:

PDF, 1.35 MB

english, 2019

9

EVALUATING MIXTURE MODELS FOR BUILDING RNA KNOWLEDGE-BASED POTENTIALS

SIM, ADELENE Y. L., SCHWANDER, OLIVIER, LEVITT, MICHAEL, BERNAUER, JULIE

Journal:

Journal of Bioinformatics and Computational Biology

Year:

2012

Language:

english

File:

PDF, 294 KB

english, 2012

10

Salt dependence of the radius of gyration and flexibility of single-stranded DNA in solution probed by small-angle x-ray scattering

Sim, Adelene Y. L., Lipfert, Jan, Herschlag, Daniel, Doniach, Sebastian

Journal:

Physical Review E

Year:

2012

Language:

english

File:

PDF, 587 KB

english, 2012

11

Modeling Protein-RNA Complexes

Sim, Adelene, Chen, Jinglin, Bernauer, Julie

Journal:

Biophysical Journal

Year:

2016

Language:

english

File:

PDF, 45 KB

english, 2016

12

[IEEE 2018 IEEE International Conference on Data Mining (ICDM) - Singapore, Singapore (2018.11.17-2018.11.20)] 2018 IEEE International Conference on Data Mining (ICDM) - Record2Vec: Unsupervised Representation Learning for Structured Records

Sim, Adelene Y.L., Borthwick, Andrew

Year:

2018

Language:

english

File:

PDF, 218 KB

english, 2018

13

A Protein-RNA Knowledge-Based Potential for Scoring and Refinement

Sim, Adelene Y.L., Guilhot-Gaudeffroy, Adrien, Verma, Chandra, Minary, Peter, Bernauer, Julie

Journal:

Biophysical Journal

Year:

2014

Language:

english

File:

PDF, 42 KB

english, 2014

14

How does a hydrocarbon staple affect peptide hydrophobicity?

Sim, Adelene Y. L., Verma, Chandra

Journal:

Journal of Computational Chemistry

Year:

2015

Language:

english

File:

PDF, 1.06 MB

english, 2015

15

Virtual Dengue Virus: The INS and OUTS

Marzinek, Jan K., Huber, Roland G., Holdbrook, Daniel, Boon, Priscilla L.S., Sim, Adelene Y.L., Martins, Ana S., Saw, Wuan G., Martins, Ivo C., Anand, Ganesh S., Grüber, Gerhard, Lok, Shee-Mei, Wohlan

Journal:

Biophysical Journal

Year:

2018

Language:

english

File:

PDF, 49 KB

english, 2018

16

Homology Modeling of RNA Using Hierarchical Natural Moves

An Lee, Xiong, Sim, Adelene Y.L

Journal:

Biophysical Journal

Year:

2017

Language:

english

File:

PDF, 47 KB

english, 2017

17

R248Q mutation-Beyond p53-DNA binding

Ng, Jeremy W. K., Lama, Dilraj, Lukman, Suryani, Lane, David P., Verma, Chandra S., Sim, Adelene Y. L.

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2015

Language:

english

File:

PDF, 684 KB

english, 2015

18

Lactate dehydrogenase kinetics predict chemotherapy response in recurrent metastatic nasopharyngeal carcinoma

Huang, Luo, Sim, Adelene Y. L., Wu, Yongzhong, Liang, Zhongguo, Li, Kaiguo, Du, Youqin, Ong, Enya H. W., Tan, Hong Qi, Wee, Joseph T. S., Xie, Yue, Shu, Xiaolei, Wang, Ying, Chua, Melvin L. K., Zhu, X

Journal:

Therapeutic Advances in Medical Oncology

Year:

2020

File:

PDF, 1.12 MB

2020

19

Clustering to identify RNA conformations constrained by secondary structure

Adelene Y. L. Sim and Michael Levitt

Journal:

Proceedings of the National Academy of Sciences

Year:

2011

Language:

english

File:

PDF, 1.40 MB

english, 2011

20

Dynamical traps in Wang-Landau sampling of continuous systems: Mechanism and solution

Koh, Yang Wei, Sim, Adelene Y. L., Lee, Hwee Kuan

Journal:

Physical Review E

Year:

2015

Language:

english

File:

PDF, 1.25 MB

english, 2015

21

Mixing and Matching Detergents for Membrane Protein NMR Structure Determination

Columbus, Linda, Lipfert, Jan, Jambunathan, Kalyani, Fox, Daniel A., Sim, Adelene Y. L., Doniach, Sebastian, Lesley, Scott A.

Journal:

Journal of the American Chemical Society

Year:

2009

Language:

english

File:

PDF, 1.25 MB

english, 2009

22

Mechanism of Stapled Peptide Binding to MDM2: Possible Consequences for Peptide Design

Sim, Adelene Y. L., Joseph, Thomas, Lane, David P., Verma, Chandra

Journal:

Journal of Chemical Theory and Computation

Year:

2014

Language:

english

File:

PDF, 2.07 MB

english, 2014

23

A spatiotemporal characterization of the effect of p53 phosphorylation on its interaction with MDM2

ElSawy, Karim M, Sim, Adelene, Lane, David P, Verma, Chandra S, Caves, Leo SD

Journal:

Year:

2015

Language:

english

File:

PDF, 1.56 MB

english, 2015

24

Structure mapping of dengue and Zika viruses reveals functional long-range interactions

Huber, Roland G., Lim, Xin Ni, Ng, Wy Ching, Sim, Adelene Y. L., Poh, Hui Xian, Shen, Yang, Lim, Su Ying, Sundstrom, Karin B., Sun, Xuyang, Aw, Jong Ghut, Too, Horng Khit, Boey, Peng Hee, Wilm, Andrea

Journal:

Nature Communications

Year:

2019

Language:

english

File:

PDF, 2.50 MB

english, 2019

25

Tertiary element interaction in HIV-1 TAR

Krawczyk, Konrad, Sim, Adelene Y. L., Knapp, Bernhard, Deane, Charlotte M, Minary, Peter

Journal:

Journal of Chemical Information and Modeling

Year:

2016

Language:

english

File:

PDF, 2.28 MB

english, 2016

26

Electrostatics of Nucleic Acid Folding under Conformational Constraint

Anthony, Peter C., Sim, Adelene Y. L., Chu, Vincent B., Doniach, Sebastian, Block, Steven M., Herschlag, Daniel

Journal:

Journal of the American Chemical Society

Year:

2012

Language:

english

File:

PDF, 1.84 MB

english, 2012

27

Scaling Behavior of Single Stranded DNA Measured by Small Angle X-ray Scattering

Sim, Adelene Y.L., Lipfert, Jan, Herschlag, Daniel, Doniach, Sebastian

Journal:

Biophysical Journal

Year:

2009

Language:

english

File:

PDF, 64 KB

english, 2009

28

Filtering RNA Decoys with Small Angle X-Ray Scattering and Clustering Analysis

Sim, Adelene Y.L., Levitt, Michael

Journal:

Biophysical Journal

Year:

2010

Language:

english

File:

PDF, 40 KB

english, 2010

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